- databases for immunodeficiency-causing mutations

   TMC6base
   Mutation registry for  Epidermodysplasia verruciformis


Database        TMC6base
Version         1.1
File            tmc6pub.html
Date            21-Aug-2008
Curator         Mauno Vihinen
Address         Institute of Medical Technology 
Address         FI-33014 University of Tampere, Finland
Phone           +358-3-3551 7735
Fax             +358-3-3551 7710
Email           Mauno.Vihinen@uta.fi
URL             http://bioinf.uta.fi/TMC6base/
FTP             ftp://protein.uta.fi/pub/tmc6pub.dat
IDR factfile    http://bioinf.uta.fi/xml/idr/ff/FF114.xml
Gene            TMC6
Disease         Epidermodysplasia verruciformis 
OMIM            605828
Sequence        IDRefSeq:D0030; IDRefSeq:C0030; UniProt:Q8IU98 
Numbering       start of the entry
Funding         Tampere University Hospital Medical Research Fund
Funding         European Union
Comments        previously known as EVER1base
Comments        sequence entry reference in every entry
//
ID              Q74X(1),Q74X(1); standard; MUTATION;
Accession       E0011
Systematic name Allele 1 and 2: g.7080C>T, c.220C>T, r.220c>u, p.Gln74X
Original code   patient
Description     Allele 1 and 2: A point mutation in the exon 4 leading to a
Description     premature stop codon
Date            28-May-2008 (Rel. 1, Created)
Date            28-May-2008 (Rel. 1, Last updated, Version 1)
RefNumber       [1]
RefCrossRef     PUBMED; 17916203
RefAuthors      Aochi, S., Nakanishi, G., Suzuki, N., Setsu, N., Suzuki, 
RefAuthors      D., Aya, K., Iwatsuki, K.
RefTitle        A novel homozygous mutation of the EVER1/TMC6 gene in a 
RefTitle        japanese patient with epidermodysplasia verruciformis.
RefLoc          Br J Dermatol:1265-1266 (2007)
FeatureHeader   allele; 1
Feature         dna; 1
Feature           /rnalink: 2
Feature           /name: point
Feature           /loc: IDRefSeq: D0030: 7080
Feature           /change: c -> t
Feature           /genomic_region: exon; 4
Feature         rna; 2
Feature           /dnalink: 1
Feature           /aalink: 3
Feature           /name: nonsense
Feature           /loc: IDRefSeq: C0030; GI:34222212; TMC6C: 361
Feature           /codon: cag -> tag; 1
Feature         aa; 3
Feature           /rnalink: 2
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: Q8IU98; Q8IU98: 74
Feature           /change: Q -> X
FeatureHeader   allele; 2
Feature         dna; 4
Feature           /rnalink: 5
Feature           /name: point
Feature           /loc: IDRefSeq: D0030: 7080
Feature           /change: c -> t
Feature           /genomic_region: exon; 4
Feature         rna; 5
Feature           /dnalink: 4
Feature           /aalink: 6
Feature           /name: nonsense
Feature           /loc: IDRefSeq: C0030; GI:34222212; TMC6C: 361
Feature           /codon: cag -> tag; 1
Feature         aa; 6
Feature           /rnalink: 5
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: Q8IU98; Q8IU98: 74
Feature           /change: Q -> X
Symptoms        Multiple scaly erythematous plaques in neck, trunk and
Symptoms        extremities
Age             11
Sex             XX
Ethnic origin   Mongoloid; Japan
Parents         Consanguineous
//
ID              R94X(1a),R94X(1a); standard; MUTATION;
Accession       E0001
Systematic name Allele 1 and 2: g.7532C>T, c.280C>T, r.280c>u, p.Arg94X
Original code   A1-IV-1
Description     Allele 1 and 2: a point mutation in the exon 5 leading to a
Description     premature stop codon
Date            04-Feb-2004 (Rel. 1, Created)
Date            04-Feb-2004 (Rel. 1, Last updated, Version 1)
RefNumber       [1]
RefCrossRef     PUBMED; 12426567
RefAuthors      Ramoz, N., Rueda, L. A., Bouadjar, B., Montoya, L. S., 
RefAuthors      Orth, G., Favre, M.
RefTitle        Mutations in two adjacent novel genes are associated with 
RefTitle        epidermodysplasia verruciformis.
RefLoc          Nat Genet 32:579-581 (2002)
FeatureHeader   allele; 1
Feature         dna; 1
Feature           /rnalink: 2
Feature           /name: point
Feature           /loc: IDRefSeq: D0030: 7532
Feature           /change: c -> t
Feature           /CpG; 1
Feature           /genomic_region: exon; 5
Feature         rna; 2
Feature           /dnalink: 1
Feature           /aalink: 3
Feature           /name: nonsense
Feature           /loc: IDRefSeq: C0030: 421
Feature           /codon: cga -> tga; 1
Feature         aa; 3
Feature           /rnalink: 2
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: Q8IU98; TMC6_HUMAN: 94
Feature           /change: R -> X
FeatureHeader   allele; 2
Feature         dna; 4
Feature           /rnalink: 5
Feature           /name: point
Feature           /loc: IDRefSeq: D0030: 7532
Feature           /change: c -> t
Feature           /CpG; 1
Feature           /genomic_region: exon; 5
Feature         rna; 5
Feature           /dnalink: 4
Feature           /aalink: 6
Feature           /name: nonsense
Feature           /loc: IDRefSeq: C0030: 421
Feature           /codon: cga -> tga; 1
Feature         aa; 6
Feature           /rnalink: 5
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: Q8IU98; TMC6_HUMAN: 94
Feature           /change: R -> X
Sex             XY
Ethnic origin   Algerian
Parents         Consanguineous
Relative        TMC6base; E0002 brother
//
ID              R94X(1b),R94X(1b); standard; MUTATION;
Accession       E0002
Systematic name Allele 1 and 2: g.7532C>T, c.280C>T, r.280c>u, p.Arg94X
Original code   A1-IV-4
Description     Allele 1 and 2: a point mutation in the exon 5 leading to a
Description     premature stop codon
Date            04-Feb-2004 (Rel. 1, Created)
Date            04-Feb-2004 (Rel. 1, Last updated, Version 1)
RefNumber       [1]
RefCrossRef     PUBMED; 12426567
RefAuthors      Ramoz, N., Rueda, L. A., Bouadjar, B., Montoya, L. S., 
RefAuthors      Orth, G., Favre, M.
RefTitle        Mutations in two adjacent novel genes are associated with 
RefTitle        epidermodysplasia verruciformis.
RefLoc          Nat Genet 32:579-581 (2002)
FeatureHeader   allele; 1
Feature         dna; 1
Feature           /rnalink: 2
Feature           /name: point
Feature           /loc: IDRefSeq: D0030: 7532
Feature           /change: c -> t
Feature           /CpG; 1
Feature           /genomic_region: exon; 5
Feature         rna; 2
Feature           /dnalink: 1
Feature           /aalink: 3
Feature           /name: nonsense
Feature           /loc: IDRefSeq: C0030: 421
Feature           /codon: cga -> tga; 1
Feature         aa; 3
Feature           /rnalink: 2
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: Q8IU98; TMC6_HUMAN: 94
Feature           /change: R -> X
FeatureHeader   allele; 2
Feature         dna; 4
Feature           /rnalink: 5
Feature           /name: point
Feature           /loc: IDRefSeq: D0030: 7532
Feature           /change: c -> t
Feature           /CpG; 1
Feature           /genomic_region: exon; 5
Feature         rna; 5
Feature           /dnalink: 4
Feature           /aalink: 6
Feature           /name: nonsense
Feature           /loc: IDRefSeq: C0030: 421
Feature           /codon: cga -> tga; 1
Feature         aa; 6
Feature           /rnalink: 5
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: Q8IU98; TMC6_HUMAN: 94
Feature           /change: R -> X
Sex             XY
Ethnic origin   Algerian
Parents         Consanguineous
Relative        TMC6base; E0001 brother
//
ID              R94X(2),R94X(2); standard; MUTATION;
Accession       E0003
Systematic name Allele 1 and 2: g.7532C>T, c.280C>T, r.280c>u, p.Arg94X
Original code   A2-IV-1
Description     Allele 1 and 2: a point mutation in the exon 5 leading to a
Description     premature stop codon
Date            04-Feb-2004 (Rel. 1, Created)
Date            04-Feb-2004 (Rel. 1, Last updated, Version 1)
RefNumber       [1]
RefCrossRef     PUBMED; 12426567
RefAuthors      Ramoz, N., Rueda, L. A., Bouadjar, B., Montoya, L. S., 
RefAuthors      Orth, G., Favre, M.
RefTitle        Mutations in two adjacent novel genes are associated with 
RefTitle        epidermodysplasia verruciformis.
RefLoc          Nat Genet 32:579-581 (2002)
FeatureHeader   allele; 1
Feature         dna; 1
Feature           /rnalink: 2
Feature           /name: point
Feature           /loc: IDRefSeq: D0030: 7532
Feature           /change: c -> t
Feature           /CpG; 1
Feature           /genomic_region: exon; 5
Feature         rna; 2
Feature           /dnalink: 1
Feature           /aalink: 3
Feature           /name: nonsense
Feature           /loc: IDRefSeq: C0030: 421
Feature           /codon: cga -> tga; 1
Feature         aa; 3
Feature           /rnalink: 2
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: Q8IU98; TMC6_HUMAN: 94
Feature           /change: R -> X
FeatureHeader   allele; 2
Feature         dna; 4
Feature           /rnalink: 5
Feature           /name: point
Feature           /loc: IDRefSeq: D0030: 7532
Feature           /change: c -> t
Feature           /CpG; 1
Feature           /genomic_region: exon; 5
Feature         rna; 5
Feature           /dnalink: 4
Feature           /aalink: 6
Feature           /name: nonsense
Feature           /loc: IDRefSeq: C0030: 421
Feature           /codon: cga -> tga; 1
Feature         aa; 6
Feature           /rnalink: 5
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: Q8IU98; TMC6_HUMAN: 94
Feature           /change: R -> X
Sex             XX
Ethnic origin   Algerian
Parents         Consanguineous
//
ID              Y248X(1),Intron 8(1); standard; MUTATION;
Accession       E0007
Systematic name Allele 1: g.8737C>A, c.744C>A, r.744c>a, p.Tyr248X
Systematic name Allele 2: g.IVS8-2A>T, c.892-2A>T, r.892-2a>u,
Original code   65-year-old Japanese woman
Description     Allele 1: a point mutation in the exon 8 leading to a
Description     premature stop codon
Description     Allele 2: a point mutation in the intron 8 leading to an
Description     amino acid change
Date            07-May-2004 (Rel. 1, Created)
Date            07-May-2004 (Rel. 1, Last updated, Version 1)
RefNumber       [1]
RefCrossRef     PUBMED; 15042430
RefAuthors      Tate, G., Suzuki, T., Kishimoto, K., Mitsuya, T.
RefTitle        Novel mutations of EVER1/TMC6 gene in a japanese patient 
RefTitle        with epidermodysplasia verruciformis.
RefLoc          J Hum Genet 49:223-225 (2004)
FeatureHeader   allele; 1
Feature         dna; 1
Feature           /rnalink: 2
Feature           /name: point
Feature           /loc: IDRefSeq: D0030: 8737
Feature           /change: c -> a
Feature           /genomic_region: exon; 8
Feature         rna; 2
Feature           /dnalink: 1
Feature           /aalink: 3
Feature           /name: nonsense
Feature           /loc: IDRefSeq: C0030: 885
Feature           /codon: tac -> taa; 3
Feature         aa; 3
Feature           /rnalink: 2
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: Q8IU98; TMC6_HUMAN: 248
Feature           /change: Y -> X
FeatureHeader   allele; 2
Feature         dna; 4
Feature           /rnalink: 5
Feature           /name: point
Feature           /loc: IDRefSeq: D0030: 9227
Feature           /change: a -> t
Feature           /genomic_region: intron; 8
Feature         rna; 5
Feature           /dnalink: 4
Feature           /aalink: 6
Feature           /name: unknown
Feature           /inexloc: -2
Feature         aa; 6
Feature           /rnalink: 5
Feature           /name: unknown
Symptoms        Flat warts beginning when she was a teenager, Bowen disease
Symptoms        in the hand three times, gastric cancer, multiple skin
Symptoms        cancers in her face (squamous cell carcinoma and Bowen
Symptoms        disease)
Sex             XX
Ethnic origin   Mongoloid; Japan
Parents         Non-consanguineous
//
ID              @Y306X317(1a),@Y306X317(1a); standard; MUTATION;
Accession       E0008
Systematic name Allele 1 and 2: g.9249_9253dup, c.912_916dup, r.912_916dup,
Systematic name p.Tyr306fsX12
Original code   Family 2, propand
Description     Allele 1 and 2: A frame shift duplication mutation in the
Description     exon 9 leading to a premature stop codon
Date            22-Mar-2007 (Rel. 1, Created)
Date            22-Mar-2007 (Rel. 1, Last updated, Version 1)
RefNumber       [1]
RefCrossRef     PUBMED; 17008061
RefAuthors      Zuo, Y. G., Ma, D., Zhang, Y., Qiao, J., Wang, B.
RefTitle        Identification of a novel mutation and a genetic 
RefTitle        polymorphism of EVER1 gene in two families with 
RefTitle        epidermodysplasia verruciformis.
RefLoc          J Dermatol Sci:153-159 (2006)
FeatureHeader   allele; 1
Feature         dna; 1
Feature           /rnalink: 2
Feature           /name: duplication
Feature           /loc: IDRefSeq: D0030: 9254
Feature           /change: +catgt
Feature           /genomic_region: exon; 9
Feature         rna; 2
Feature           /dnalink: 1
Feature           /aalink: 3
Feature           /name: frameshift
Feature           /loc: IDRefSeq: C0030; GI:34222212; TMC6C: 1058
Feature         aa; 3
Feature           /rnalink: 2
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: Q8IU98; Q8IU98: 306
Feature           /change: Y -> SCTTATTVTP RX
FeatureHeader   allele; 2
Feature         dna; 4
Feature           /rnalink: 5
Feature           /name: duplication
Feature           /loc: IDRefSeq: D0030: 9254
Feature           /change: +catgt
Feature           /genomic_region: exon; 9
Feature         rna; 5
Feature           /dnalink: 4
Feature           /aalink: 6
Feature           /name: frameshift
Feature           /loc: IDRefSeq: C0030; GI:34222212; TMC6C: 1058
Feature         aa; 6
Feature           /rnalink: 5
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: Q8IU98; Q8IU98: 306
Feature           /change: Y -> SCTTATTVTP RX
Symptoms        flat-wart-like brown papules on his face which gradually
Symptoms        progressed on the body for 18 years
Sex             XY
Ethnic origin   Mongoloid; China
Parents         Consanguineous
Relative        TMC6base; E0009 brother
//
ID              @Y306X317(1b),@Y306X317(1b); standard; MUTATION;
Accession       E0009
Systematic name Allele 1 and 2: g.9249_9253dup, c.912_916dup, r.912_916dup,
Systematic name p.Tyr306fsX12
Original code   Family 2, elder brother of the propand
Description     Allele 1 and 2: A frame shift duplication mutation in the
Description     exon 9 leading to a premature stop codon
Date            22-Mar-2007 (Rel. 1, Created)
Date            22-Mar-2007 (Rel. 1, Last updated, Version 1)
RefNumber       [1]
RefCrossRef     PUBMED; 17008061
RefAuthors      Zuo, Y. G., Ma, D., Zhang, Y., Qiao, J., Wang, B.
RefTitle        Identification of a novel mutation and a genetic 
RefTitle        polymorphism of EVER1 gene in two families with 
RefTitle        epidermodysplasia verruciformis.
RefLoc          J Dermatol Sci:153-159 (2006)
FeatureHeader   allele; 1
Feature         dna; 1
Feature           /rnalink: 2
Feature           /name: duplication
Feature           /loc: IDRefSeq: D0030: 9254
Feature           /change: +catgt
Feature           /genomic_region: exon; 9
Feature         rna; 2
Feature           /dnalink: 1
Feature           /aalink: 3
Feature           /name: frameshift
Feature           /loc: IDRefSeq: C0030; GI:34222212; TMC6C: 1058
Feature         aa; 3
Feature           /rnalink: 2
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: Q8IU98; Q8IU98: 306
Feature           /change: Y -> SCTTATTVTP RX
FeatureHeader   allele; 2
Feature         dna; 4
Feature           /rnalink: 5
Feature           /name: duplication
Feature           /loc: IDRefSeq: D0030: 9254
Feature           /change: +catgt
Feature           /genomic_region: exon; 9
Feature         rna; 5
Feature           /dnalink: 4
Feature           /aalink: 6
Feature           /name: frameshift
Feature           /loc: IDRefSeq: C0030; GI:34222212; TMC6C: 1058
Feature         aa; 6
Feature           /rnalink: 5
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: Q8IU98; Q8IU98: 306
Feature           /change: Y -> SCTTATTVTP RX
Symptoms        Patient has the same history of disease and skin lesions as
Symptoms        his brother (E0008)
Sex             XY
Ethnic origin   Mongoloid; China
Parents         Consanguineous
Relative        TMC6base; E0008 brother
//
ID              #L323X349(1),#L323X349(1); standard; MUTATION;
Accession       E0010
Systematic name Allele 1 and 2: g.9305delT, c.968delT, r.968delu,
Systematic name p.Leu323fsX27
Original code   34-year-old man
Description     Allele 1 and 2: A frame shift deletion mutation in the exon
Description     9 leading to a premature stop codon
Date            22-Mar-2007 (Rel. 1, Created)
Date            22-Mar-2007 (Rel. 1, Last updated, Version 1)
RefNumber       [1]
RefCrossRef     PUBMED; 17139267
RefAuthors      Gober, M. D., Rady, P. L., He, Q., Tucker, S. B., Tyring, 
RefAuthors      S. K., Gaspari, A. A.
RefTitle        Novel homozygous frameshift mutation of EVER1 gene in an 
RefTitle        epidermodysplasia verruciformis patient.
RefLoc          J Invest Dermatol:817-820 (2007)
FeatureHeader   allele; 1
Feature         dna; 1
Feature           /rnalink: 2
Feature           /name: deletion
Feature           /loc: IDRefSeq: D0030: 9305
Feature           /change: -t
Feature           /genomic_region: exon; 9
Feature         rna; 2
Feature           /dnalink: 1
Feature           /aalink: 3
Feature           /name: frameshift
Feature           /loc: IDRefSeq: C0030; GI:34222212; TMC6C: 1109
Feature         aa; 3
Feature           /rnalink: 2
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: Q8IU98; Q8IU98: 323
Feature           /change: L -> RMAASAHPGW VACPTTCPWP TSPLWAX
FeatureHeader   allele; 2
Feature         dna; 4
Feature           /rnalink: 5
Feature           /name: deletion
Feature           /loc: IDRefSeq: D0030: 9305
Feature           /change: -t
Feature           /genomic_region: exon; 9
Feature         rna; 5
Feature           /dnalink: 4
Feature           /aalink: 6
Feature           /name: frameshift
Feature           /loc: IDRefSeq: C0030; GI:34222212; TMC6C: 1109
Feature         aa; 6
Feature           /rnalink: 5
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: Q8IU98; Q8IU98: 323
Feature           /change: L -> RMAASAHPGW VACPTTCPWP TSPLWAX
Symptoms        multiple verrucous lesions on his face, torso, and
Symptoms        extrimities that first appeared at age 14
Sex             XY
Ethnic origin   Pakistani
Parents         Consanguineous
//
ID              E576X(1a),E576X(1a); standard; MUTATION;
Accession       E0004
Systematic name Allele 1 and 2: g.14026G>T, c.1726G>T, r.1726g>u, p.Glu576X
Original code   C1-IV-1
Description     Allele 1 and 2: a point mutation in the exon 14 leading to
Description     a premature stop codon
Date            04-Feb-2004 (Rel. 1, Created)
Date            04-Feb-2004 (Rel. 1, Last updated, Version 1)
RefNumber       [1]
RefCrossRef     PUBMED; 12426567
RefAuthors      Ramoz, N., Rueda, L. A., Bouadjar, B., Montoya, L. S., 
RefAuthors      Orth, G., Favre, M.
RefTitle        Mutations in two adjacent novel genes are associated with 
RefTitle        epidermodysplasia verruciformis.
RefLoc          Nat Genet 32:579-581 (2002)
FeatureHeader   allele; 1
Feature         dna; 1
Feature           /rnalink: 2
Feature           /name: point
Feature           /loc: IDRefSeq: D0030: 14026
Feature           /change: g -> t
Feature           /genomic_region: exon; 14
Feature         rna; 2
Feature           /dnalink: 1
Feature           /aalink: 3
Feature           /name: nonsense
Feature           /loc: IDRefSeq: C0030: 1867
Feature           /codon: gag -> tag; 1
Feature         aa; 3
Feature           /rnalink: 2
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: Q8IU98; TMC6_HUMAN: 576
Feature           /change: E -> X
FeatureHeader   allele; 2
Feature         dna; 4
Feature           /rnalink: 5
Feature           /name: point
Feature           /loc: IDRefSeq: D0030: 14026
Feature           /change: g -> t
Feature           /genomic_region: exon; 14
Feature         rna; 5
Feature           /dnalink: 4
Feature           /aalink: 6
Feature           /name: nonsense
Feature           /loc: IDRefSeq: C0030: 1867
Feature           /codon: gag -> tag; 1
Feature         aa; 6
Feature           /rnalink: 5
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: Q8IU98; TMC6_HUMAN: 576
Feature           /change: E -> X
Sex             XY
Ethnic origin   Colombian
Parents         Consanguineous
Relative        TMC6base; E0005 sister
Relative        TMC6base; E0006 sister
//
ID              E576X(1b),E576X(1b); standard; MUTATION;
Accession       E0005
Systematic name Allele 1 and 2: g.14026G>T, c.1726G>T, r.1726g>u, p.Glu576X
Original code   C1-IV-3
Description     Allele 1 and 2: a point mutation in the exon 14 leading to
Description     a premature stop codon
Date            04-Feb-2004 (Rel. 1, Created)
Date            04-Feb-2004 (Rel. 1, Last updated, Version 1)
RefNumber       [1]
RefCrossRef     PUBMED; 12426567
RefAuthors      Ramoz, N., Rueda, L. A., Bouadjar, B., Montoya, L. S., 
RefAuthors      Orth, G., Favre, M.
RefTitle        Mutations in two adjacent novel genes are associated with 
RefTitle        epidermodysplasia verruciformis.
RefLoc          Nat Genet 32:579-581 (2002)
FeatureHeader   allele; 1
Feature         dna; 1
Feature           /rnalink: 2
Feature           /name: point
Feature           /loc: IDRefSeq: D0030: 14026
Feature           /change: g -> t
Feature           /genomic_region: exon; 14
Feature         rna; 2
Feature           /dnalink: 1
Feature           /aalink: 3
Feature           /name: nonsense
Feature           /loc: IDRefSeq: C0030: 1867
Feature           /codon: gag -> tag; 1
Feature         aa; 3
Feature           /rnalink: 2
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: Q8IU98; TMC6_HUMAN: 576
Feature           /change: E -> X
FeatureHeader   allele; 2
Feature         dna; 4
Feature           /rnalink: 5
Feature           /name: point
Feature           /loc: IDRefSeq: D0030: 14026
Feature           /change: g -> t
Feature           /genomic_region: exon; 14
Feature         rna; 5
Feature           /dnalink: 4
Feature           /aalink: 6
Feature           /name: nonsense
Feature           /loc: IDRefSeq: C0030: 1867
Feature           /codon: gag -> tag; 1
Feature         aa; 6
Feature           /rnalink: 5
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: Q8IU98; TMC6_HUMAN: 576
Feature           /change: E -> X
Sex             XX
Ethnic origin   Colombian
Parents         Consanguineous
Relative        TMC6base; E0004 brother
Relative        TMC6base; E0006 sister
//
ID              E576X(1c),E576X(1c); standard; MUTATION;
Accession       E0006
Systematic name Allele 1 and 2: g.14026G>T, c.1726G>T, r.1726g>u, p.Glu576X
Original code   C1-IV-5
Description     Allele 1 and 2: a point mutation in the exon 14 leading to
Description     a premature stop codon
Date            04-Feb-2004 (Rel. 1, Created)
Date            04-Feb-2004 (Rel. 1, Last updated, Version 1)
RefNumber       [1]
RefCrossRef     PUBMED; 12426567
RefAuthors      Ramoz, N., Rueda, L. A., Bouadjar, B., Montoya, L. S., 
RefAuthors      Orth, G., Favre, M.
RefTitle        Mutations in two adjacent novel genes are associated with 
RefTitle        epidermodysplasia verruciformis.
RefLoc          Nat Genet 32:579-581 (2002)
FeatureHeader   allele; 1
Feature         dna; 1
Feature           /rnalink: 2
Feature           /name: point
Feature           /loc: IDRefSeq: D0030: 14026
Feature           /change: g -> t
Feature           /genomic_region: exon; 14
Feature         rna; 2
Feature           /dnalink: 1
Feature           /aalink: 3
Feature           /name: nonsense
Feature           /loc: IDRefSeq: C0030: 1867
Feature           /codon: gag -> tag; 1
Feature         aa; 3
Feature           /rnalink: 2
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: Q8IU98; TMC6_HUMAN: 576
Feature           /change: E -> X
FeatureHeader   allele; 2
Feature         dna; 4
Feature           /rnalink: 5
Feature           /name: point
Feature           /loc: IDRefSeq: D0030: 14026
Feature           /change: g -> t
Feature           /genomic_region: exon; 14
Feature         rna; 5
Feature           /dnalink: 4
Feature           /aalink: 6
Feature           /name: nonsense
Feature           /loc: IDRefSeq: C0030: 1867
Feature           /codon: gag -> tag; 1
Feature         aa; 6
Feature           /rnalink: 5
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: Q8IU98; TMC6_HUMAN: 576
Feature           /change: E -> X
Sex             XX
Ethnic origin   Colombian
Parents         Consanguineous
Relative        TMC6base; E0004 brother
Relative        TMC6base; E0005 sister
//

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Last modified 25.03.2011