There are several alternative methods for detection of positional sequence conservation and identification of individual conserved residues within a position in a multiple sequence alignment. The visualization of MSAs makes it convenient to interpret the information contained in them.
ConSeq |
http://conseq.tau.ac.il/ |
(Berezin, et al., 2004) |
ConSSeq |
http://sms.cbi.cnptia.embrapa.br/SMS/STINGm/consseq/ |
(Higa, et al., 2004) |
ConSurf |
http://consurf.tau.ac.il/ |
(Glaser, et al., 2003; Landau, et al., 2005) |
MultiDisp |
http://bioinf.uta.fi/cgi-bin/MultiDisp.cgi |
(Riikonen, et al., unpublished results) |
ProCon |
http://dna.uta.fi/ProCon/ |
(Shen and Vihinen, 2004) |
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